| Protein ZmIAA8 | |
|---|---|
|
ZmIAA8 is a protein in the Aux/IAA family.
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| Information | |
| Coreg Name: | ZmIAA8 |
| Species: | Maize |
| Coreg Family: | Aux/IAA |
| Gene Name(Synonym): | IAA11 |
| Uniprot ID: | B4FD48 |
Protein ZmIAA8
ZmIAA8 is a protein in the Aux/IAA family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF02309 | |
| Zm00001eb135570_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d041418 | DAPseq |  |
sequence | fimo | position |
| Zm00001d041418 | DAPseq |  |
sequence | fimo | position |
| Zm00001d041418 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d041418 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmIAA8 is the regulator
Interactions where ZmIAA8 is the target
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Zm00001eb135570_T001 from maize genome v5
Amino Acid Sequence
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MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02309 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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ACAGCGCCAAGGGCACCACCAGCAA...
ACAGCGCCAAGGGCACCACCAGCAAGGACCAAGACAGAGCACAGCGCAGCTCGTCGGCCTCTCGACGCCGGTTGCTGCAACCACCGCCTTTATTGCCCACGCGGGCCGTGCGGAAGAAGCAAGAAGACACGCCAATGGAGGTCGCCGCAGCATCGGCAGCGAGCTACGGATTCAAGGCCGACGACGACGTTGACAGCCTCAGGGCGACGGAGCTCAGGCTTGGCCTGCCGGGCACGGAGGAGAAGGAGGAGGCCGAGGAGCCCCAGCACAAGGCGGCACCGCCGCCGCCGTCCACGCCCAGAGGCAAGAAGCGCGACGTCGTCGCCAGCAGCGGGCCCGAGGACGCGCCCAAGAAGCGCGACTGCGAGACCGACGCCGACGCCGACGCCGCGCCGCCGCCGGCCGCCAAGGCTCAGCTGGTGGGATGGCCGCCGGTGAGGTCGTACAGGAAGAGCTGCTTCCAGCAGCAGGCGGCGGCCAAGAACAAGCCGGCGGCAGCCCTGGCGGAGGAGGCCCCGGCCGCCGGCGGGTTGTTCGTGAAGGTGAGCATGGACGGCGCCCCCTACCTCAGGAAGGTGGACCTCAAGATGTACAAGGGCTACCGCGAGCTGCGGGAGGCGCTGGAGGCCATGTTCCTCTGCTTCTCCGGCGCCGCCGACGCGCCCGCCGTCAACCCCTCCGACTTCGCCGTCACCTACGAGGACAAGGACGGCGACCTCATGCTCGTCGGCGACGTGCCCTTCGGCATGTTCATCAGCACCTGCAAGAGGCTGAGGATCATGAAAGGGTCTGAAGCGAGAGGGCTCGGCTCGGCCAAGAACAACTGATGATGAGGCGTCTATCGCATGCTTGTGCTGTGCGTGCGTGCATGCGCCAGCAAATTCTTTTGTTCTTTTGGGGTCTTATTTCTTCTCCAAGGCGTCCCTGCATGGGTGTGGGCGTGTGGTGTTGAGTATTATGTACCTTCTCCCCTAGCATTGTCTGTGCCAACAATGGAGCAGCAGCTAGCAGCAAACCAGAGACATGGCGAGGCGAAAGATGAAGCTGCTTGCTTGGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAGCTTTGTGCATGCGTGGAATGATGTGTGGTCGCTTTGTTCTTTTTCTTTTGTGCCCCTTGTAGGGGTGTGTGTGTGTGTGTTTAGCAAGACATGCAAAAGGAGTGGAGAGTCGAGTTGAATCTCCATGATGCGTGGTTGTACAAAGCCAAAGATCACTCTTCTTTCTTGTCTATCAGTCTATTGTCTATCTATCGATCAGCAGCCTGGTCGTTGCTTCTGTAATTGCGAGTGTTGAAATTGCAGGGGAGGAATTGTTTTC
GRMZM2G167794_T01 from maize genome v3
Amino Acid Sequence
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MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
Nucleotide Sequence
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CACGCACAGCGCCAAGGGCACCACC...
CACGCACAGCGCCAAGGGCACCACCAGCAAGGACCAAGACAGAGCACAGCGCAGCTCGTCGGCCTCTCGACGCCGGTTGCTGCAACCACCGCCTTTATTGCCCACGCGGGCCGTGCGGAAGAAGCAAGAAGACACGCCAATGGAGGTCGCCGCAGCATCGGCAGCGAGCTACGGATTCAAGGCCGACGACGACGTTGACAGCCTCAGGGCGACGGAGCTCAGGCTTGGCCTGCCGGGCACGGAGGAGAAGGAGGAGGCCGAGGAGCCCCAGCACAAGGCGGCACCGCCGCCGCCGTCCACGCCCAGAGGCAAGAAGCGCGACGTCGTCGCCAGCAGCGGGCCCGAGGACGCGCCCAAGAAGCGCGACTGCGAGACCGACGCCGACGCCGACGCCGCGCCGCCGCCGGCCGCCAAGGCTCAGCTGGTGGGATGGCCGCCGGTGAGGTCGTACAGGAAGAGCTGCTTCCAGCAGCAGGCGGCGGCCAAGAACAAGCCGGCGGCAGCCCTGGCGGAGGAGGCCCCGGCCGCCGGCGGGTTGTTCGTGAAGGTGAGCATGGACGGCGCCCCCTACCTCAGGAAGGTGGACCTCAAGATGTACAAGGGCTACCGCGAGCTGCGGGAGGCGCTGGAGGCCATGTTCCTCTGCTTCTCCGGCGCCGCCGACGCGCCCGCCGTCAACCCCTCCGACTTCGCCGTCACCTACGAGGACAAGGACGGCGACCTCATGCTCGTCGGCGACGTGCCCTTCGGCATGTTCATCAGCACCTGCAAGAGGCTGAGGATCATGAAAGGGTCTGAAGCGAGAGGGCTCGGCTCGGCCAAGAACAACTGATGATGAGGCGTCTATCGCATGCTTGTGCTGTGCGTGCGTGCATGCGCCAGCAAATTCTTTTGTTCTTTTGGGGTCTTATTTCTTCTCCAAGGCGTCCCTGCATGGGTGTGGGCGTGTGGTGTTGAGTATTATGTACCTTCTCCCCTAGCATTGTCTGTGCCAACAATGGAGCAGCAGCTAGCAGCAAACCAGAGACATGGCGAGGCGAAAGATGAAGCTGCTTGCTTGGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAGCTTTGTGCATGCGTGGAATGATGTGTGGTCGCTTTGTTCTTTTTCTTTTGTGCCCCTTGTAGGGGTGTGTGTGTGTGTGTTTAGCAAGACATGCAAAAGGAGTGGAGAGTCGAGTTGAATCTCCATGATGCGTGGTTGTACAAAGCCAAAGATCACTCTTCTTTCTTGTCTATCAGTCTATTGTCTATCTATCGATCAGCAGCCTGGTCGTTGCTTCTGTAATTGCGAGTGTTGAAATTGCAGGGGAGGAATTGTTTTCCTCTCTGTCCCTGGTGAGTTGAGTTATCTATCCGAATAACACGATCGAGGAACTAG
Zm00001d041418_T001 from maize genome v4
Amino Acid Sequence
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MEVAAASAASYGFKADDDVDSLRATELRLGLPGTEEKEEAEEPQHKAAPPPPSTPRGKKRDVVASSGPEDAPKKRDCETD
ADADAAPPPAAKAQLVGWPPVRSYRKSCFQQQAAAKNKPAAALAEEAPAAGGLFVKVSMDGAPYLRKVDLKMYKGYRELR
EALEAMFLCFSGAADAPAVNPSDFAVTYEDKDGDLMLVGDVPFGMFISTCKRLRIMKGSEARGLGSAKNN
Nucleotide Sequence
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ACAGCGCCAAGGGCACCACCAGCAA...
ACAGCGCCAAGGGCACCACCAGCAAGGACCAAGACAGAGCACAGCGCAGCTCGTCGGCCTCTCGACGCCGGTTGCTGCAACCACCGCCTTTATTGCCCACGCGGGCCGTGCGGAAGAAGCAAGAAGACACGCCAATGGAGGTCGCCGCAGCATCGGCAGCGAGCTACGGATTCAAGGCCGACGACGACGTTGACAGCCTCAGGGCGACGGAGCTCAGGCTTGGCCTGCCGGGCACGGAGGAGAAGGAGGAGGCCGAGGAGCCCCAGCACAAGGCGGCACCGCCGCCGCCGTCCACGCCCAGAGGCAAGAAGCGCGACGTCGTCGCCAGCAGCGGGCCCGAGGACGCGCCCAAGAAGCGCGACTGCGAGACCGACGCCGACGCCGACGCCGCGCCGCCGCCGGCCGCCAAGGCTCAGCTGGTGGGATGGCCGCCGGTGAGGTCGTACAGGAAGAGCTGCTTCCAGCAGCAGGCGGCGGCCAAGAACAAGCCGGCGGCAGCCCTGGCGGAGGAGGCCCCGGCCGCCGGCGGGTTGTTCGTGAAGGTGAGCATGGACGGCGCCCCCTACCTCAGGAAGGTGGACCTCAAGATGTACAAGGGCTACCGCGAGCTGCGGGAGGCGCTGGAGGCCATGTTCCTCTGCTTCTCCGGCGCCGCCGACGCGCCCGCCGTCAACCCCTCCGACTTCGCCGTCACCTACGAGGACAAGGACGGCGACCTCATGCTCGTCGGCGACGTGCCCTTCGGCATGTTCATCAGCACCTGCAAGAGGCTGAGGATCATGAAAGGGTCTGAAGCGAGAGGGCTCGGCTCGGCCAAGAACAACTGATGATGAGGCGTCTATCGCATGCTTGTGCTGTGCGTGCGTGCATGCGCCAGCAAATTCTTTTGTTCTTTTGGGGTCTTATTTCTTCTCCAAGGCGTCCCTGCATGGGTGTGGGCGTGTGGTGTTGAGTATTATGTACCTTCTCCCCTAGCATTGTCTGTGCCAACAATGGAGCAGCAGCTAGCAGCAAACCAGAGACATGGCGAGGCGAAAGATGAAGCTGCTTGCTTGGAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAGCTTTGTGCATGCGTGGAATGATGTGTGGTCGCTTTGTTCTTTTTCTTTTGTGCCCCTTGTAGGGGTGTGTGTGTGTGTGTTTAGCAAGACATGCAAAAGGAGTGGAGAGTCGAGTTGAATCTCCATGATGCGTGGTTGTACAAAGCCAAAGATCACTCTTCTTTCTTGTCTATCAGTCTATTGTCTATCTATCGATCAGCAGCCTGGTCGTTGCTTCTGTAATTGCGAGTGTTGAAATTGCAGGGGAGGAATTGTTTTCCTCTCTGTCCCTGGTGAGTT
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